STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1E4F0Uncharacterized protein. (685 aa)    
Predicted Functional Partners:
A0A2V1DGC3
Uncharacterized protein.
   
 
 0.644
A0A2V1DNL0
Uncharacterized protein.
   
 
 0.644
A0A2V1DU45
Nonsense-mediated mRNA decay factor.
   
  0.509
A0A2V1E2V2
Sister chromatid cohesion protein.
   
    0.443
A0A2V1E3Q7
Uncharacterized protein.
   
    0.443
A0A2V1DA00
Nuclear cap-binding protein subunit 2.
    
 
 0.442
A0A2V1DHK1
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 
 0.442
A0A2V1E206
Uncharacterized protein.
    
 
 0.442
A0A2V1D580
HRDC domain-containing protein.
   
 
  0.422
A0A2V1E933
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 
  0.422
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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