STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1E6N7RCC1/BLIP-II. (604 aa)    
Predicted Functional Partners:
A0A2V1DK69
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.999
A0A2V1DQF9
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.977
A0A2V1DC46
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.934
A0A2V1DZD3
DUF1903-domain-containing protein.
    
 0.869
A0A2V1E8U4
Histone H2A; Belongs to the histone H2A family.
    
 0.869
A0A2V1D7Y9
Histone H3; Belongs to the histone H3 family.
   
 0.845
A0A2V1E0D8
Histone-fold-containing protein.
   
 0.845
A0A2V1DSH8
Uncharacterized protein.
   
 0.804
A0A2V1DW60
RanBD1 domain-containing protein.
   
 0.804
A0A2V1E9W2
Histone H2B; Belongs to the histone H2B family.
    
 0.804
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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