STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1E8L8Sec34-domain-containing protein. (892 aa)    
Predicted Functional Partners:
A0A2V1DAQ8
COG4-domain-containing protein.
    
 0.999
A0A2V1DLK1
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.999
A0A2V1DMW7
Uncharacterized protein.
   
 0.999
A0A2V1DZW2
Dor1-domain-containing protein.
    
 0.999
A0A2V1D6P6
COG2 domain-containing protein.
   
 0.956
A0A2V1DN18
Uncharacterized protein.
   
 0.956
A0A2V1E3T4
Uncharacterized protein.
   
 0.956
A0A2V1E8L5
V-snare-domain-containing protein.
   
 
 0.930
A0A2V1DPL1
Syntaxin-5.
    
 0.927
A0A2V1DNN2
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.898
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.