Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A2V1DJ57 | A0A2V1DMW1 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Ferredoxin. | 0.943 |
A0A2V1DJ57 | A0A2V1E6P2 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Peroxisomal multifunctional enzyme type 2. | 0.456 |
A0A2V1DJ57 | A0A2V1E6U6 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 2-deoxy-D-gluconate 3-dehydrogenase. | 0.436 |
A0A2V1DJ57 | A0A2V1E9R5 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | NAD(P)-binding protein. | 0.436 |
A0A2V1DJ57 | A0A2V1EBI5 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitroalkane oxidase in complex with Spermine, A competitive inhibitor. | 0.796 |
A0A2V1DJ57 | A0A2V1ECL9 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.943 |
A0A2V1DMW1 | A0A2V1DJ57 | Ferredoxin. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.943 |
A0A2V1DMW1 | A0A2V1E6P2 | Ferredoxin. | Peroxisomal multifunctional enzyme type 2. | 0.520 |
A0A2V1DMW1 | A0A2V1E6U6 | Ferredoxin. | 2-deoxy-D-gluconate 3-dehydrogenase. | 0.515 |
A0A2V1DMW1 | A0A2V1E9R5 | Ferredoxin. | NAD(P)-binding protein. | 0.515 |
A0A2V1DVT6 | A0A2V1E9R5 | MFS general substrate transporter. | NAD(P)-binding protein. | 0.647 |
A0A2V1E6P2 | A0A2V1DJ57 | Peroxisomal multifunctional enzyme type 2. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.456 |
A0A2V1E6P2 | A0A2V1DMW1 | Peroxisomal multifunctional enzyme type 2. | Ferredoxin. | 0.520 |
A0A2V1E6P2 | A0A2V1E9R5 | Peroxisomal multifunctional enzyme type 2. | NAD(P)-binding protein. | 0.459 |
A0A2V1E6P2 | A0A2V1E9V3 | Peroxisomal multifunctional enzyme type 2. | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.588 |
A0A2V1E6P2 | A0A2V1EBI5 | Peroxisomal multifunctional enzyme type 2. | Nitroalkane oxidase in complex with Spermine, A competitive inhibitor. | 0.729 |
A0A2V1E6P2 | A0A2V1ECL9 | Peroxisomal multifunctional enzyme type 2. | Uncharacterized protein. | 0.520 |
A0A2V1E6P2 | A0A2V1ECW1 | Peroxisomal multifunctional enzyme type 2. | Malonyl-CoA-acyl carrier protein transacylase. | 0.575 |
A0A2V1E6P2 | A0A2V1EEN3 | Peroxisomal multifunctional enzyme type 2. | TPR-like protein. | 0.907 |
A0A2V1E6U6 | A0A2V1DJ57 | 2-deoxy-D-gluconate 3-dehydrogenase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.436 |
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