STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1ECH1Putative dihydrodipicolinate synthase; Belongs to the DapA family. (324 aa)    
Predicted Functional Partners:
A0A2V1DM07
Tryptophan synthase.
    
  0.764
A0A2V1E1Z9
L-galactonate dehydratase.
     
 0.652
A0A2V1E554
Putative glutamate-cysteine ligase Gcs1.
    
 0.652
A0A2V1ECV9
PLP-dependent transferase.
   
 
 0.631
A0A2V1ECN0
Aspartate aminotransferase.
   
 0.614
A0A2V1D973
Aldolase.
  
  
 
0.612
A0A2V1DD29
FAD dependent oxidoreductase.
   
 
  0.587
A0A2V1EB14
Malate synthase; Belongs to the malate synthase family.
   
 
 0.585
A0A2V1D7X5
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.574
A0A2V1DDM9
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.572
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.