STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2V1EG66Glycoside hydrolase family 16 protein. (364 aa)    
Predicted Functional Partners:
A0A2V1D366
Uncharacterized protein.
    
 0.675
A0A2V1DCL1
Dyp-type peroxidase.
    
  0.619
A0A2V1DEJ5
Peroxidase TAP.
    
  0.619
A0A2V1E760
SCA7-domain-containing protein.
    
 0.584
A0A2V1EBJ4
TFIID-18kDa-domain-containing protein.
    
  0.584
A0A2V1DGT5
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.556
A0A2V1D109
Uncharacterized protein.
    
 0.548
A0A2V1DZP8
SUN domain-containing protein.
    
 0.539
A0A2V1DUK6
TFIID_20kDa domain-containing protein.
    
 0.528
A0A2V1EFZ0
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.524
Your Current Organism:
Periconia macrospinosa
NCBI taxonomy Id: 97972
Other names: P. macrospinosa
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