STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tatAUnannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (74 aa)    
Predicted Functional Partners:
tatC2
Unannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
  
 0.955
MFFC18_31030
Unannotated protein.
    
  0.954
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.834
MFFC18_51510
Unannotated protein.
  
    0.661
MFFC18_37810
Unannotated protein.
   
 
 0.486
MFFC18_49890
Unannotated protein.
   
 
 0.486
glpG
Unannotated protein.
   
 
 0.486
fliG_1
Unannotated protein.
     
 0.459
MFFC18_32860
Unannotated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
 
 0.434
ttrB
Unannotated protein.
  
 
 0.424
Your Current Organism:
Mariniblastus fucicola
NCBI taxonomy Id: 980251
Other names: DSM 26290, LMG 29748, LMG:29748, M. fucicola, Mariniblastus fucicola Lage et al. 2017, Planctomyces sp. FC18, Planctomycetaceae bacterium FC18, strain FC18
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