STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xecEUnannotated protein. (233 aa)    
Predicted Functional Partners:
pknB_26
Unannotated protein.
       0.773
MFFC18_31110
Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.695
MFFC18_30710
Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.693
acr1_1
Unannotated protein.
  
 
   0.692
fabG_8
Unannotated protein.
  
     0.688
acr1_2
Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.612
lgrD_1
Unannotated protein.
  
 
 0.602
MFFC18_29290
Unannotated protein.
  
     0.600
MFFC18_30420
Unannotated protein.
  
 
 0.518
pksJ_2
Unannotated protein.
  
 
 0.500
Your Current Organism:
Mariniblastus fucicola
NCBI taxonomy Id: 980251
Other names: DSM 26290, LMG 29748, LMG:29748, M. fucicola, Mariniblastus fucicola Lage et al. 2017, Planctomyces sp. FC18, Planctomycetaceae bacterium FC18, strain FC18
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.