STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000218485_02794Unannotated protein. (229 aa)    
Predicted Functional Partners:
GCA_000218485_02793
Unannotated protein.
 
     0.833
GCA_000218485_02795
Unannotated protein.
 
     0.831
GCA_000218485_02642
Unannotated protein.
  
     0.739
GCA_000218485_01903
Unannotated protein.
  
     0.662
GCA_000218485_02792
Unannotated protein.
 
     0.656
GCA_000218485_02153
Unannotated protein.
  
     0.562
GCA_000218485_00135
Unannotated protein.
  
     0.522
GCA_000218485_00836
Unannotated protein.
  
     0.519
GCA_000218485_01926
Unannotated protein.
  
     0.510
GCA_000218485_01427
Unannotated protein.
  
     0.458
Your Current Organism:
Aquimarina agarivorans
NCBI taxonomy Id: 980584
Other names: A. agarivorans, ATCC BAA-2612, Aquimarina agarivorans Zhou et al. 2015, CICC 10835, Flavobacteriaceae bacterium HQM9, strain HQM9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.