STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_022188F-box/LRR-repeat protein 13. (687 aa)    
Predicted Functional Partners:
L484_008884
Cysteine proteinase RD21a; Belongs to the peptidase C1 family.
   
 0.480
L484_027445
Cysteine proteinase RD21a; Belongs to the peptidase C1 family.
   
 0.480
L484_003813
Oryzain alpha chain; Belongs to the peptidase C1 family.
   
 0.480
L484_021896
Oryzain alpha chain; Belongs to the peptidase C1 family.
   
 0.480
L484_024140
BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.424
L484_014948
Mitogen-activated protein kinase kinase kinase 1.
    
  0.407
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.