STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_017811DNA polymerase I. (1147 aa)    
Predicted Functional Partners:
L484_025737
Formamidopyrimidine-DNA glycosylase.
  
  
 0.818
L484_017714
Uncharacterized protein.
   
 0.673
L484_017715
Uncharacterized protein.
   
 0.673
L484_000578
Protein TIFY 4A.
   
 0.673
L484_015622
Exonuclease 1.
  
 
 0.672
L484_017398
Exonuclease 1.
  
 
 0.672
L484_007211
Uncharacterized protein.
   
 0.664
L484_008614
Crossover junction endonuclease MUS81.
   
 
 0.661
L484_003710
DNA excision repair protein ERCC-1.
     
 0.658
L484_018739
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
 0.649
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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