STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_018168Uncharacterized protein. (471 aa)    
Predicted Functional Partners:
L484_025645
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.851
L484_026213
Photosystem I reaction center subunit VI.
   
 
 0.710
L484_025917
Photosystem I reaction center subunit III.
   
 
 0.702
L484_009923
Photosystem I reaction center subunit psaK.
   
 
 0.702
L484_023779
Photosystem I reaction center subunit V.
   
 
 0.698
L484_012368
Photosystem I reaction center subunit II.
   
 
 0.693
L484_000838
NAD(P)H-quinone oxidoreductase chain 4.
    
 
 0.692
L484_015920
Photosystem I reaction center subunit IV A.
   
 
 0.688
L484_016312
Uncharacterized protein.
   
 
 0.683
L484_006337
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
    
   0.668
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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