STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_016029Uncharacterized protein. (227 aa)    
Predicted Functional Partners:
L484_001656
Ubiquitin-60S ribosomal protein L40.
    
 0.971
L484_024415
Ubiquitin-40S ribosomal protein S27a.
   
 0.971
L484_007783
Uncharacterized protein.
   
 0.924
L484_008835
Ubiquitin-conjugating enzyme E2 27; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.924
L484_007626
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.921
L484_021101
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.921
L484_026332
Ubiquitin-conjugating enzyme E2 14.
   
 0.899
L484_026331
Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.899
L484_025195
Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.899
L484_013423
Ubiquitin-conjugating enzyme E2 19; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.889
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.