STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEP10848.1PAS domain S-box. (364 aa)    
Predicted Functional Partners:
AEP10847.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain protein.
 0.996
AEP13819.1
PAS domain S-box.
 
0.985
AEP11315.1
Two-component system, cell cycle response regulator DivK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain protein.
 
 0.953
AEP13480.1
Putative ATPase.
    
 0.939
AEP13730.1
Signal transduction histidine kinase.
 
 
0.937
AEP13551.1
Signal transduction histidine kinase.
 
 
0.931
AEP12866.1
GAF domain protein.
    
 0.903
AEP12741.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 
 0.895
AEP12190.1
PAS domain S-box.
 
0.890
AEP13405.1
Two component transcriptional regulator, winged helix family.
 
 0.880
Your Current Organism:
Chloracidobacterium thermophilum
NCBI taxonomy Id: 981222
Other names: C. thermophilum B, Candidatus Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum str. B, Chloracidobacterium thermophilum strain B
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