STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEP11197.1Uncharacterized conserved protein. (160 aa)    
Predicted Functional Partners:
AEP11196.1
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-like deacylase.
       0.773
AEP11195.1
Hypothetical protein.
       0.693
AEP11193.1
Prepilin-type N-terminal cleavage/methylation domain protein.
       0.531
AEP11194.1
Prepilin-type N-terminal cleavage/methylation domain protein.
       0.531
AEP11198.1
Hypothetical protein.
       0.513
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.513
AEP11200.1
Conserved hypothetical protein TIGR00275.
       0.513
Your Current Organism:
Chloracidobacterium thermophilum
NCBI taxonomy Id: 981222
Other names: C. thermophilum B, Candidatus Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum str. B, Chloracidobacterium thermophilum strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.