Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEP10965.1 | AEP11107.1 | Cabther_A0192 | Cabther_A0343 | Superfamily II DNA and RNA helicase. | Rad3-related DNA helicase. | 0.792 |
AEP10965.1 | AEP12234.1 | Cabther_A0192 | Cabther_A1484 | Superfamily II DNA and RNA helicase. | DNA-directed RNA polymerase subunit alpha. | 0.979 |
AEP10965.1 | rpoB | Cabther_A0192 | Cabther_A0241 | Superfamily II DNA and RNA helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.978 |
AEP10965.1 | rpoC | Cabther_A0192 | Cabther_A0242 | Superfamily II DNA and RNA helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.895 |
AEP10965.1 | rpoZ | Cabther_A0192 | Cabther_A0574 | Superfamily II DNA and RNA helicase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.979 |
AEP11107.1 | AEP10965.1 | Cabther_A0343 | Cabther_A0192 | Rad3-related DNA helicase. | Superfamily II DNA and RNA helicase. | 0.792 |
AEP11107.1 | AEP12234.1 | Cabther_A0343 | Cabther_A1484 | Rad3-related DNA helicase. | DNA-directed RNA polymerase subunit alpha. | 0.987 |
AEP11107.1 | AEP13209.1 | Cabther_A0343 | Cabther_B0206 | Rad3-related DNA helicase. | Hypothetical protein. | 0.792 |
AEP11107.1 | AEP13304.1 | Cabther_A0343 | Cabther_B0302 | Rad3-related DNA helicase. | Superfamily II DNA/RNA helicase, SNF2 family. | 0.817 |
AEP11107.1 | rpoB | Cabther_A0343 | Cabther_A0241 | Rad3-related DNA helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.987 |
AEP11107.1 | rpoC | Cabther_A0343 | Cabther_A0242 | Rad3-related DNA helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.827 |
AEP11107.1 | rpoZ | Cabther_A0343 | Cabther_A0574 | Rad3-related DNA helicase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.988 |
AEP12234.1 | AEP10965.1 | Cabther_A1484 | Cabther_A0192 | DNA-directed RNA polymerase subunit alpha. | Superfamily II DNA and RNA helicase. | 0.979 |
AEP12234.1 | AEP11107.1 | Cabther_A1484 | Cabther_A0343 | DNA-directed RNA polymerase subunit alpha. | Rad3-related DNA helicase. | 0.987 |
AEP12234.1 | AEP13209.1 | Cabther_A1484 | Cabther_B0206 | DNA-directed RNA polymerase subunit alpha. | Hypothetical protein. | 0.979 |
AEP12234.1 | AEP13304.1 | Cabther_A1484 | Cabther_B0302 | DNA-directed RNA polymerase subunit alpha. | Superfamily II DNA/RNA helicase, SNF2 family. | 0.979 |
AEP12234.1 | nusA | Cabther_A1484 | Cabther_A0623 | DNA-directed RNA polymerase subunit alpha. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.998 |
AEP12234.1 | rpoB | Cabther_A1484 | Cabther_A0241 | DNA-directed RNA polymerase subunit alpha. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
AEP12234.1 | rpoC | Cabther_A1484 | Cabther_A0242 | DNA-directed RNA polymerase subunit alpha. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
AEP12234.1 | rpoZ | Cabther_A1484 | Cabther_A0574 | DNA-directed RNA polymerase subunit alpha. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.998 |
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