Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEP11107.1 | AEP12234.1 | Cabther_A0343 | Cabther_A1484 | Rad3-related DNA helicase. | DNA-directed RNA polymerase subunit alpha. | 0.987 |
| AEP11107.1 | AEP12485.1 | Cabther_A0343 | Cabther_A1739 | Rad3-related DNA helicase. | RecF/RecN/SMC N terminal domain protein. | 0.802 |
| AEP11107.1 | polA | Cabther_A0343 | Cabther_A2135 | Rad3-related DNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.990 |
| AEP11107.1 | recA | Cabther_A0343 | Cabther_A0040 | Rad3-related DNA helicase. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.802 |
| AEP11107.1 | sbcD | Cabther_A0343 | Cabther_A1738 | Rad3-related DNA helicase. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.974 |
| AEP11107.1 | topA | Cabther_A0343 | Cabther_A1011 | Rad3-related DNA helicase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.893 |
| AEP12015.1 | AEP12067.1 | Cabther_A1262 | Cabther_A1316 | Single stranded DNA-binding protein (ssb). | Glutamate synthase domain 2. | 0.560 |
| AEP12015.1 | polA | Cabther_A1262 | Cabther_A2135 | Single stranded DNA-binding protein (ssb). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.683 |
| AEP12015.1 | topA | Cabther_A1262 | Cabther_A1011 | Single stranded DNA-binding protein (ssb). | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.987 |
| AEP12067.1 | AEP12015.1 | Cabther_A1316 | Cabther_A1262 | Glutamate synthase domain 2. | Single stranded DNA-binding protein (ssb). | 0.560 |
| AEP12067.1 | AEP13329.1 | Cabther_A1316 | Cabther_B0327 | Glutamate synthase domain 2. | Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductase, alpha subunit. | 0.576 |
| AEP12067.1 | polA | Cabther_A1316 | Cabther_A2135 | Glutamate synthase domain 2. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.499 |
| AEP12067.1 | recA | Cabther_A1316 | Cabther_A0040 | Glutamate synthase domain 2. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.493 |
| AEP12067.1 | topA | Cabther_A1316 | Cabther_A1011 | Glutamate synthase domain 2. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.973 |
| AEP12234.1 | AEP11107.1 | Cabther_A1484 | Cabther_A0343 | DNA-directed RNA polymerase subunit alpha. | Rad3-related DNA helicase. | 0.987 |
| AEP12234.1 | leuS | Cabther_A1484 | Cabther_A1525 | DNA-directed RNA polymerase subunit alpha. | leucyl-tRNA synthetase; Eubacterial and mitochondrial family; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.534 |
| AEP12234.1 | polA | Cabther_A1484 | Cabther_A2135 | DNA-directed RNA polymerase subunit alpha. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.454 |
| AEP12234.1 | recA | Cabther_A1484 | Cabther_A0040 | DNA-directed RNA polymerase subunit alpha. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.513 |
| AEP12234.1 | topA | Cabther_A1484 | Cabther_A1011 | DNA-directed RNA polymerase subunit alpha. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.946 |
| AEP12485.1 | AEP11107.1 | Cabther_A1739 | Cabther_A0343 | RecF/RecN/SMC N terminal domain protein. | Rad3-related DNA helicase. | 0.802 |
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