STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEP12056.1Outer membrane protein. (582 aa)    
Predicted Functional Partners:
AEP12057.1
birA, biotin-[acetyl-CoA-carboxylase] ligase region.
  
    0.774
AEP10835.1
Outer membrane protein/protective antigen OMA87.
 
   
 0.727
AEP12058.1
Hypothetical protein.
 
     0.697
AEP11482.1
Lipid A core - O-antigen ligase-like enzyme.
 
     0.682
AEP11677.1
Hypothetical protein.
  
   
 0.663
AEP12518.1
Putative permease.
  
     0.654
AEP12803.1
Outer membrane protein assembly complex, YaeT protein.
 
   
 0.645
AEP13126.1
Gluconolactonase.
  
     0.641
AEP10937.1
Fibronectin type III domain protein.
  
     0.624
AEP12571.1
Organic solvent tolerance protein OstA.
  
  
 0.599
Your Current Organism:
Chloracidobacterium thermophilum
NCBI taxonomy Id: 981222
Other names: C. thermophilum B, Candidatus Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum str. B, Chloracidobacterium thermophilum strain B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.