STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEP12205.1Tetratricopeptide repeat protein. (273 aa)    
Predicted Functional Partners:
AEP12193.1
Tetratricopeptide repeat protein.
  
   0.778
AEP11903.1
Tetratricopeptide repeat protein.
  
     0.769
AEP12612.1
Tetratricopeptide repeat protein.
  
     0.764
AEP13031.1
Tetratricopeptide repeat protein.
  
     0.756
AEP12070.1
Tfp pilus assembly protein PilF.
  
     0.755
AEP11293.1
Tetratricopeptide repeat protein.
  
     0.719
AEP13020.1
Tetratricopeptide repeat protein.
  
     0.710
AEP12523.1
Tfp pilus assembly protein PilF.
  
   0.685
AEP10950.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
     0.625
AEP12204.1
CDP-diglyceride synthetase; Belongs to the CDS family.
       0.561
Your Current Organism:
Chloracidobacterium thermophilum
NCBI taxonomy Id: 981222
Other names: C. thermophilum B, Candidatus Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum str. B, Chloracidobacterium thermophilum strain B
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