STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEP13339.1Nucleoside-diphosphate-sugar epimerase. (313 aa)    
Predicted Functional Partners:
AEP12488.1
Nucleotide sugar dehydrogenase.
 
 0.947
AEP11524.1
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
0.928
AEP13226.1
Nucleoside-diphosphate-sugar epimerase.
  
  
 
0.924
AEP11630.1
UDP-glucose pyrophosphorylase.
 
 0.918
AEP13775.1
Nucleoside-diphosphate-sugar epimerase.
  
  
 
0.917
AEP11901.1
Nucleoside-diphosphate-sugar epimerase.
  
  
  0.911
AEP13110.1
Galactose-1-phosphate uridylyltransferase, family 1.
   
 
 0.903
rnc
Ribonuclease III, bacterial; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
   0.806
AEP13338.1
Methylase involved in ubiquinone/menaquinone biosynthesis.
  
    0.774
AEP13337.1
Hypothetical protein.
       0.762
Your Current Organism:
Chloracidobacterium thermophilum
NCBI taxonomy Id: 981222
Other names: C. thermophilum B, Candidatus Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum str. B, Chloracidobacterium thermophilum strain B
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