STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEP13469.1Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS like protein. (157 aa)    
Predicted Functional Partners:
AEP13468.1
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL like protein.
 
 0.999
AEP13358.1
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
  
 0.850
AEP13359.1
Putative MobA-related protein.
 
  
 0.828
AEP13467.1
N-acyl-D-aspartate/D-glutamate deacylase.
       0.775
psuG
Putative enzyme involved in pigment biosynthesis; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
       0.741
AEP12876.1
Aspartate/tyrosine/aromatic aminotransferase.
 
      0.449
AEP13470.1
Hypothetical protein.
       0.423
Your Current Organism:
Chloracidobacterium thermophilum
NCBI taxonomy Id: 981222
Other names: C. thermophilum B, Candidatus Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum str. B, Chloracidobacterium thermophilum strain B
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