STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPN5Calpain 5. (651 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
 0.828
CAST
Calpastatin.
    
 0.820
ENSPCAP00000006974
annotation not available
    
 0.635
CDK5R1
Cyclin dependent kinase 5 regulatory subunit 1.
   
  0.574
CAPN3
Calpain 3.
    
 0.549
CAPN9
Calpain 9.
    
 0.549
BAX
BCL2 associated X, apoptosis regulator.
   
 0.545
CHMP4B
Charged multivesicular body protein 4B.
    
 0.542
CHMP4C
Charged multivesicular body protein 4C.
    
 0.542
TLN1
Talin 1.
    
 0.538
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.