Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DOC2ADouble C2 domain alpha. (400 aa)    
Predicted Functional Partners:
UBASH3B
Ubiquitin associated and SH3 domain containing B.
    
   0.934
RPH3AL
Rabphilin 3A like (without C2 domains).
 
    
 0.912
CEBPZ
CCAAT enhancer binding protein zeta.
    
 
 0.902
SCGN
Secretagogin, EF-hand calcium binding protein.
    
 
 0.874
SNAP25
Synaptosome associated protein 25.
   
 0.790
MVK
Mevalonate kinase.
    
   0.707
KCTD21
Potassium channel tetramerization domain containing 21.
    
   0.672
RABIF
RAB interacting factor.
      
 0.645
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
     
 0.641
SNAP29
Synaptosome associated protein 29.
    
 0.640
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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