STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLCD3BTLC domain containing 3B. (275 aa)    
Predicted Functional Partners:
ENSPCAP00000010334
annotation not available
    
 
 0.681
ENSPCAP00000001534
annotation not available
    
 
 0.604
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.576
ENSPCAP00000002722
annotation not available
    
 
 0.574
ENSPCAP00000007015
annotation not available
    
 
 0.563
POLR3C
RNA polymerase III subunit C.
    
   0.559
SPHK2
Sphingosine kinase 2.
      
 0.501
TCEA2
Transcription elongation factor A2.
      
 0.499
PPP4C
Protein phosphatase 4 catalytic subunit.
    
 
 0.493
ENSPCAP00000001710
annotation not available
    
   0.463
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.