Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYO7AMyosin VIIA. (2208 aa)    
Predicted Functional Partners:
USH1C
USH1 protein network component harmonin.
   
 0.934
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.912
USH1G
USH1 protein network component sans.
   
 0.891
WHRN
Whirlin.
    
 0.857
RDX
Radixin.
    
 0.791
PCDH15
Protocadherin related 15.
    
 0.787
CDH23
Cadherin related 23.
    
 0.747
CLIC5
Chloride intracellular channel 5.
     
 0.707
ENSPCAP00000009667
annotation not available
     
 0.707
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.695
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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