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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATF6Activating transcription factor 6. (600 aa)    
Predicted Functional Partners:
HSPA5
Heat shock protein family A (Hsp70) member 5.
    
 0.963
DDIT3
DNA damage inducible transcript 3.
   
 0.952
VAPB
VAMP associated protein B and C.
     
 0.945
ATF6B
Activating transcription factor 6 beta.
    
0.929
WFS1
Wolframin ER transmembrane glycoprotein.
    
 0.925
MBTPS1
Membrane bound transcription factor peptidase, site 1.
     
 0.869
ENSPCAP00000004261
annotation not available
    
 0.863
ATF4
Activating transcription factor 4.
     
 0.853
ENSPCAP00000014410
annotation not available
     
 0.837
CREB3L1
cAMP responsive element binding protein 3 like 1.
    
 0.824
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.