Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YPEL3Yippee like 3. (196 aa)    
Predicted Functional Partners:
WDR26
WD repeat domain 26.
   
 
 0.832
ARMC8
Armadillo repeat containing 8.
    
 0.807
GID8
GID complex subunit 8 homolog.
   
 
 0.772
RANBP10
RAN binding protein 10.
   
 
 0.758
HOXB6
Homeobox B6.
      
 0.692
RANBP9
RAN binding protein 9.
   
 
 0.686
ATP1B2
ATPase Na+/K+ transporting subunit beta 2.
   
  
 0.684
KLF9
Kruppel like factor 9.
   
 
 0.627
KLF13
Kruppel like factor 13.
   
 
 0.627
MAEA
Macrophage erythroblast attacher.
    
 
 0.618
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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