Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D1TBC1 domain family member 1. (1073 aa)    
Predicted Functional Partners:
RAB8A
RAB8A, member RAS oncogene family.
    
 0.937
RAB8B
RAB8B, member RAS oncogene family.
    
 0.937
PPFIBP2
PPFIA binding protein 2.
    
   0.934
RAB14
RAB14, member RAS oncogene family.
    
 0.924
RAB10
RAB10, member RAS oncogene family.
    
 0.923
RAB11B
RAB11B, member RAS oncogene family.
    
 0.918
RAB11A
RAB11A, member RAS oncogene family.
    
 0.910
PRKAA1
Protein kinase AMP-activated catalytic subunit alpha 1.
    
 0.906
PRKAA2
Protein kinase AMP-activated catalytic subunit alpha 2.
    
 0.901
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
    
 0.895
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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