ENSPCAP00000000076 protein (Procavia capensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSPCAP00000000076

annotation not available (391 aa)

Predicted Functional Partners:

ENSPCAP00000004559

0.987

SMARCE1

0.986

SMARCD1

0.983

SMARCD2

0.967

ARID1B

0.964

SMARCD3

0.945

ARID1A

0.939

SMARCA4

0.937

SMARCA2

0.937

ARID2

0.936

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID1A	ARID2	ENSPCAP00000011565	ENSPCAP00000014366	AT-rich interaction domain 1A.	AT-rich interaction domain 2.	0.583
ARID1A	ENSPCAP00000000076	ENSPCAP00000011565	ENSPCAP00000000076	AT-rich interaction domain 1A.	annotation not available	0.939
ARID1A	ENSPCAP00000004559	ENSPCAP00000011565	ENSPCAP00000004559	AT-rich interaction domain 1A.	annotation not available	0.979
ARID1A	SMARCA2	ENSPCAP00000011565	ENSPCAP00000015897	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.964
ARID1A	SMARCA4	ENSPCAP00000011565	ENSPCAP00000013247	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.964
ARID1A	SMARCD1	ENSPCAP00000011565	ENSPCAP00000010982	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.974
ARID1A	SMARCD2	ENSPCAP00000011565	ENSPCAP00000002552	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.	0.949
ARID1A	SMARCD3	ENSPCAP00000011565	ENSPCAP00000011711	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.	0.957
ARID1A	SMARCE1	ENSPCAP00000011565	ENSPCAP00000001160	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.985
ARID1B	ARID2	ENSPCAP00000012094	ENSPCAP00000014366	AT-rich interaction domain 1B.	AT-rich interaction domain 2.	0.583
ARID1B	ENSPCAP00000000076	ENSPCAP00000012094	ENSPCAP00000000076	AT-rich interaction domain 1B.	annotation not available	0.964
ARID1B	ENSPCAP00000004559	ENSPCAP00000012094	ENSPCAP00000004559	AT-rich interaction domain 1B.	annotation not available	0.975
ARID1B	SMARCA2	ENSPCAP00000012094	ENSPCAP00000015897	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.946
ARID1B	SMARCA4	ENSPCAP00000012094	ENSPCAP00000013247	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.946
ARID1B	SMARCD1	ENSPCAP00000012094	ENSPCAP00000010982	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.963
ARID1B	SMARCD2	ENSPCAP00000012094	ENSPCAP00000002552	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.	0.938
ARID1B	SMARCD3	ENSPCAP00000012094	ENSPCAP00000011711	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.	0.947
ARID1B	SMARCE1	ENSPCAP00000012094	ENSPCAP00000001160	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.981
ARID2	ARID1A	ENSPCAP00000014366	ENSPCAP00000011565	AT-rich interaction domain 2.	AT-rich interaction domain 1A.	0.583
ARID2	ARID1B	ENSPCAP00000014366	ENSPCAP00000012094	AT-rich interaction domain 2.	AT-rich interaction domain 1B.	0.583