SLC38A9 protein (Procavia capensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

SLC38A9

Solute carrier family 38 member 9. (561 aa)

Predicted Functional Partners:

RRAGC

0.998

LAMTOR3

0.998

LAMTOR5

0.998

LAMTOR1

0.998

LAMTOR2

0.998

ENSPCAP00000007492

0.997

ENSPCAP00000000670

0.993

RRAGB

0.989

RRAGA

0.989

ENSPCAP00000002712

0.969

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000000670	ENSPCAP00000002712	ENSPCAP00000000670	ENSPCAP00000002712	annotation not available	annotation not available	0.979
ENSPCAP00000000670	ENSPCAP00000007492	ENSPCAP00000000670	ENSPCAP00000007492	annotation not available	annotation not available	0.995
ENSPCAP00000000670	LAMTOR1	ENSPCAP00000000670	ENSPCAP00000010343	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	0.995
ENSPCAP00000000670	LAMTOR2	ENSPCAP00000000670	ENSPCAP00000013568	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	0.995
ENSPCAP00000000670	LAMTOR3	ENSPCAP00000000670	ENSPCAP00000002989	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.	0.995
ENSPCAP00000000670	LAMTOR5	ENSPCAP00000000670	ENSPCAP00000006517	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	0.996
ENSPCAP00000000670	RRAGA	ENSPCAP00000000670	ENSPCAP00000003661	annotation not available	Ras related GTP binding A.	0.992
ENSPCAP00000000670	RRAGB	ENSPCAP00000000670	ENSPCAP00000003207	annotation not available	Ras related GTP binding B.	0.992
ENSPCAP00000000670	RRAGC	ENSPCAP00000000670	ENSPCAP00000002692	annotation not available	Ras related GTP binding C.	0.999
ENSPCAP00000000670	SLC38A9	ENSPCAP00000000670	ENSPCAP00000000092	annotation not available	Solute carrier family 38 member 9.	0.993
ENSPCAP00000002712	ENSPCAP00000000670	ENSPCAP00000002712	ENSPCAP00000000670	annotation not available	annotation not available	0.979
ENSPCAP00000002712	ENSPCAP00000007492	ENSPCAP00000002712	ENSPCAP00000007492	annotation not available	annotation not available	0.982
ENSPCAP00000002712	LAMTOR1	ENSPCAP00000002712	ENSPCAP00000010343	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	0.987
ENSPCAP00000002712	LAMTOR2	ENSPCAP00000002712	ENSPCAP00000013568	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	0.987
ENSPCAP00000002712	LAMTOR3	ENSPCAP00000002712	ENSPCAP00000002989	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.	0.981
ENSPCAP00000002712	LAMTOR5	ENSPCAP00000002712	ENSPCAP00000006517	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	0.983
ENSPCAP00000002712	RRAGA	ENSPCAP00000002712	ENSPCAP00000003661	annotation not available	Ras related GTP binding A.	0.981
ENSPCAP00000002712	RRAGB	ENSPCAP00000002712	ENSPCAP00000003207	annotation not available	Ras related GTP binding B.	0.981
ENSPCAP00000002712	RRAGC	ENSPCAP00000002712	ENSPCAP00000002692	annotation not available	Ras related GTP binding C.	0.996
ENSPCAP00000002712	SLC38A9	ENSPCAP00000002712	ENSPCAP00000000092	annotation not available	Solute carrier family 38 member 9.	0.969