STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPDZMultiple PDZ domain crumbs cell polarity complex component. (2068 aa)    
Predicted Functional Partners:
MPP5
Membrane palmitoylated protein 5.
    
 0.984
AMOT
Angiomotin.
    
 0.965
AMOTL1
Angiomotin like 1.
    
 0.940
AMOTL2
Angiomotin like 2.
   
 0.926
TJP3
Tight junction protein 3.
    
0.846
PLCB4
Phospholipase C beta 4.
   
  0.812
PARD3
Par-3 family cell polarity regulator.
    
0.808
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
0.799
MPP3
Membrane palmitoylated protein 3.
    
 0.798
MPP7
Membrane palmitoylated protein 7.
    
 0.798
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.