HDAC9 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HDAC9

Histone deacetylase 9. (1065 aa)

Predicted Functional Partners:

ARID4A

0.916

ENSPCAP00000003739

0.916

MACROH2A2

0.845

MACROH2A1

0.845

NCOR2

0.840

ENSPCAP00000008497

0.834

H2BC5

0.834

ENSPCAP00000013276

0.834

H2BC1

0.828

H2BC18

0.828

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ENSPCAP00000003739	ENSPCAP00000002075	ENSPCAP00000003739	AT-rich interaction domain 4A.	annotation not available	0.715
ARID4A	ENSPCAP00000008497	ENSPCAP00000002075	ENSPCAP00000008497	AT-rich interaction domain 4A.	annotation not available	0.684
ARID4A	ENSPCAP00000013276	ENSPCAP00000002075	ENSPCAP00000013276	AT-rich interaction domain 4A.	annotation not available	0.684
ARID4A	H2BC1	ENSPCAP00000002075	ENSPCAP00000000600	AT-rich interaction domain 4A.	H2B clustered histone 1.	0.684
ARID4A	H2BC18	ENSPCAP00000002075	ENSPCAP00000003039	AT-rich interaction domain 4A.	H2B clustered histone 18.	0.684
ARID4A	H2BC5	ENSPCAP00000002075	ENSPCAP00000013065	AT-rich interaction domain 4A.	H2B clustered histone 5.	0.684
ARID4A	HDAC9	ENSPCAP00000002075	ENSPCAP00000000473	AT-rich interaction domain 4A.	Histone deacetylase 9.	0.916
ARID4A	MACROH2A1	ENSPCAP00000002075	ENSPCAP00000011768	AT-rich interaction domain 4A.	macroH2A.1 histone.	0.690
ARID4A	MACROH2A2	ENSPCAP00000002075	ENSPCAP00000009839	AT-rich interaction domain 4A.	macroH2A.2 histone.	0.690
ENSPCAP00000003739	ARID4A	ENSPCAP00000003739	ENSPCAP00000002075	annotation not available	AT-rich interaction domain 4A.	0.715
ENSPCAP00000003739	ENSPCAP00000008497	ENSPCAP00000003739	ENSPCAP00000008497	annotation not available	annotation not available	0.684
ENSPCAP00000003739	ENSPCAP00000013276	ENSPCAP00000003739	ENSPCAP00000013276	annotation not available	annotation not available	0.684
ENSPCAP00000003739	H2BC1	ENSPCAP00000003739	ENSPCAP00000000600	annotation not available	H2B clustered histone 1.	0.684
ENSPCAP00000003739	H2BC18	ENSPCAP00000003739	ENSPCAP00000003039	annotation not available	H2B clustered histone 18.	0.684
ENSPCAP00000003739	H2BC5	ENSPCAP00000003739	ENSPCAP00000013065	annotation not available	H2B clustered histone 5.	0.684
ENSPCAP00000003739	HDAC9	ENSPCAP00000003739	ENSPCAP00000000473	annotation not available	Histone deacetylase 9.	0.916
ENSPCAP00000003739	MACROH2A1	ENSPCAP00000003739	ENSPCAP00000011768	annotation not available	macroH2A.1 histone.	0.690
ENSPCAP00000003739	MACROH2A2	ENSPCAP00000003739	ENSPCAP00000009839	annotation not available	macroH2A.2 histone.	0.690
ENSPCAP00000008497	ARID4A	ENSPCAP00000008497	ENSPCAP00000002075	annotation not available	AT-rich interaction domain 4A.	0.684
ENSPCAP00000008497	ENSPCAP00000003739	ENSPCAP00000008497	ENSPCAP00000003739	annotation not available	annotation not available	0.684