Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1orf158Chromosome 1 open reading frame 158. (194 aa)    
Predicted Functional Partners:
EFHB
EF-hand domain family member B.
   
   0.921
C1orf194
Chromosome 1 open reading frame 194.
   
   0.917
ENSPCAP00000007308
annotation not available
   
   0.913
EFHC1
EF-hand domain containing 1.
   
   0.913
TEKT1
Tektin 1.
   
   0.906
ENSPCAP00000007734
annotation not available
   
   0.906
TEKT2
Tektin 2.
   
   0.906
PACRG
Parkin coregulated.
   
   0.904
ENSPCAP00000005490
annotation not available
   
   0.904
C9orf135
Chromosome 9 open reading frame 135.
   
   0.903
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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