STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM8PR/SET domain 8. (671 aa)    
Predicted Functional Partners:
SH3PXD2B
SH3 and PX domains 2B.
    
  0.479
ENSPCAP00000002148
annotation not available
    
  0.479
NCF1
Neutrophil cytosolic factor 1.
    
  0.479
SH3PXD2A
SH3 and PX domains 2A.
    
  0.479
NCF4
Neutrophil cytosolic factor 4.
    
  0.479
DUOX2
Dual oxidase 2.
   
  0.475
DUOX1
Dual oxidase 1.
   
  0.475
XKRX
XK related X-linked.
   
  0.475
ENSPCAP00000004906
annotation not available
   
  0.475
CYBB
Cytochrome b-245 beta chain.
   
  0.475
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.