Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZFHX4Zinc finger homeobox 4. (3208 aa)    
Predicted Functional Partners:
ENSPCAP00000006786
annotation not available
    
 
 0.913
NFIB
Nuclear factor I B.
    
 
 0.680
RUNX2
RUNX family transcription factor 2.
     
 0.672
RUNX3
RUNX family transcription factor 3.
     
 0.672
RUNX1
RUNX family transcription factor 1.
     
 0.672
LCP2
Lymphocyte cytosolic protein 2.
      
 0.658
TGFB1
Transforming growth factor beta 1.
    
  0.650
PRR16
Proline rich 16.
      
 0.606
ENSPCAP00000003251
annotation not available
      
 0.589
NDRG1
N-myc downstream regulated 1.
      
 0.589
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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