ENSPCAP00000001023 protein (Procavia capensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

ENSPCAP00000001023

annotation not available (105 aa)

Predicted Functional Partners:

ENSPCAP00000014229

0.998

ENSPCAP00000007529

0.997

RPL26L1

0.996

RPL30

0.996

ENSPCAP00000004458

0.996

RPL24

0.996

RPL36

0.996

RPL8

0.996

ENSPCAP00000007154

0.996

RPL10L

0.996

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000001023	ENSPCAP00000004458	ENSPCAP00000001023	ENSPCAP00000004458	annotation not available	annotation not available	0.996
ENSPCAP00000001023	ENSPCAP00000007154	ENSPCAP00000001023	ENSPCAP00000007154	annotation not available	annotation not available	0.996
ENSPCAP00000001023	ENSPCAP00000007529	ENSPCAP00000001023	ENSPCAP00000007529	annotation not available	annotation not available	0.997
ENSPCAP00000001023	ENSPCAP00000014229	ENSPCAP00000001023	ENSPCAP00000014229	annotation not available	annotation not available	0.998
ENSPCAP00000001023	RPL10L	ENSPCAP00000001023	ENSPCAP00000009472	annotation not available	Ribosomal protein L10 like.	0.996
ENSPCAP00000001023	RPL24	ENSPCAP00000001023	ENSPCAP00000005482	annotation not available	Ribosomal protein L24.	0.996
ENSPCAP00000001023	RPL26L1	ENSPCAP00000001023	ENSPCAP00000002071	annotation not available	Ribosomal protein L26 like 1.	0.996
ENSPCAP00000001023	RPL30	ENSPCAP00000001023	ENSPCAP00000002305	annotation not available	Ribosomal protein L30.	0.996
ENSPCAP00000001023	RPL36	ENSPCAP00000001023	ENSPCAP00000006177	annotation not available	Ribosomal protein L36.	0.996
ENSPCAP00000001023	RPL8	ENSPCAP00000001023	ENSPCAP00000006565	annotation not available	Ribosomal protein L8.	0.996
ENSPCAP00000004458	ENSPCAP00000001023	ENSPCAP00000004458	ENSPCAP00000001023	annotation not available	annotation not available	0.996
ENSPCAP00000004458	ENSPCAP00000007154	ENSPCAP00000004458	ENSPCAP00000007154	annotation not available	annotation not available	0.999
ENSPCAP00000004458	ENSPCAP00000007529	ENSPCAP00000004458	ENSPCAP00000007529	annotation not available	annotation not available	0.999
ENSPCAP00000004458	ENSPCAP00000014229	ENSPCAP00000004458	ENSPCAP00000014229	annotation not available	annotation not available	0.999
ENSPCAP00000004458	RPL10L	ENSPCAP00000004458	ENSPCAP00000009472	annotation not available	Ribosomal protein L10 like.	0.998
ENSPCAP00000004458	RPL24	ENSPCAP00000004458	ENSPCAP00000005482	annotation not available	Ribosomal protein L24.	0.999
ENSPCAP00000004458	RPL26L1	ENSPCAP00000004458	ENSPCAP00000002071	annotation not available	Ribosomal protein L26 like 1.	0.999
ENSPCAP00000004458	RPL30	ENSPCAP00000004458	ENSPCAP00000002305	annotation not available	Ribosomal protein L30.	0.999
ENSPCAP00000004458	RPL36	ENSPCAP00000004458	ENSPCAP00000006177	annotation not available	Ribosomal protein L36.	0.999
ENSPCAP00000004458	RPL8	ENSPCAP00000004458	ENSPCAP00000006565	annotation not available	Ribosomal protein L8.	0.999