Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMUB2Transmembrane and ubiquitin like domain containing 2. (291 aa)    
Predicted Functional Partners:
ERLIN2
ER lipid raft associated 2.
    
 
 0.953
ERLIN1
ER lipid raft associated 1.
    
 
 0.953
TMUB1
Transmembrane and ubiquitin like domain containing 1.
    
   0.952
TMEM259
Transmembrane protein 259.
    
 
 0.867
RNF5
Ring finger protein 5.
    
 
 0.806
ENSPCAP00000009736
annotation not available
    
 
 0.712
THSD7A
Thrombospondin type 1 domain containing 7A.
    
   0.667
HERPUD2
HERPUD family member 2.
      
 0.580
TMEM53
Transmembrane protein 53.
      
 0.577
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.575
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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