STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBCK1RANBP2-type and C3HC4-type zinc finger containing 1. (484 aa)    
Predicted Functional Partners:
ENSPCAP00000014419
annotation not available
   
 0.999
SHARPIN
SHANK associated RH domain interactor.
   
0.996
TNFRSF1A
TNF receptor superfamily member 1A.
    
 0.975
UBC
Ubiquitin C.
    
 0.965
TNF
Tumor necrosis factor.
    
 0.964
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.949
ENSPCAP00000011509
annotation not available
    
 0.931
BIRC2
Baculoviral IAP repeat containing 2.
    
 0.918
ENSPCAP00000012521
annotation not available
    
 0.918
TRAF5
TNF receptor associated factor 5.
    
 0.917
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.