STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBCK1RANBP2-type and C3HC4-type zinc finger containing 1. (484 aa)    
Predicted Functional Partners:
ENSPCAP00000014419
annotation not available
   
 0.999
OTULIN
OTU deubiquitinase with linear linkage specificity.
    
 0.998
SHARPIN
SHANK associated RH domain interactor.
   
 0.998
RIPK1
Receptor interacting serine/threonine kinase 1.
   
 0.988
TNFRSF1A
TNF receptor superfamily member 1A.
    
 0.984
TNF
Tumor necrosis factor.
    
 0.979
UBC
Ubiquitin C.
    
 0.962
FKBPL
FKBP prolyl isomerase like.
    
 0.962
NOD2
Nucleotide binding oligomerization domain containing 2.
    
 
 0.957
TRAF6
TNF receptor associated factor 6.
    
 0.950
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.