STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001041annotation not available (720 aa)    
Predicted Functional Partners:
TGM2
Transglutaminase 2.
    
  0.953
EPB42
Erythrocyte membrane protein band 4.2.
    
  0.879
F13B
Coagulation factor XIII B chain.
    
 0.797
ENSPCAP00000013000
annotation not available
      
 0.776
PPL
Periplakin.
     
 0.664
F2
Coagulation factor II, thrombin.
    
 0.660
ENSPCAP00000014912
annotation not available
    
  0.642
DSG4
Desmoglein 4.
    
 0.632
LIPM
Lipase family member M.
      
 0.610
RHBG
Rh family B glycoprotein (gene/pseudogene).
   
 0.609
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.