STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UFSP2UFM1 specific peptidase 2. (468 aa)    
Predicted Functional Partners:
ODR4
Odr-4 GPCR localization factor homolog.
   
 
 0.946
UBA5
Ubiquitin like modifier activating enzyme 5.
  
  
 0.764
UFL1
UFM1 specific ligase 1.
   
  
 0.714
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
   
  
 0.709
CCDC86
Coiled-coil domain containing 86.
      
 0.692
CDK5RAP3
CDK5 regulatory subunit associated protein 3.
   
  
 0.638
SGSM3
Small G protein signaling modulator 3.
      
 0.607
ZMYM4
Zinc finger MYM-type containing 4.
      
 0.602
NUBPL
Nucleotide binding protein like.
      
 0.567
OTUD3
OTU deubiquitinase 3.
      
 0.561
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.