Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001049annotation not available (344 aa)    
Predicted Functional Partners:
NME8
NME/NM23 family member 8.
    
  0.678
ZFP64
ZFP64 zinc finger protein.
    
 
 0.634
ALX3
ALX homeobox 3.
   
  
 0.625
ENSPCAP00000008802
annotation not available
    
 
 0.623
RAX2
Retina and anterior neural fold homeobox 2.
   
    0.619
CLN6
CLN6 transmembrane ER protein.
      
 0.576
ARX
Aristaless related homeobox.
   
    0.573
DRGX
Dorsal root ganglia homeobox.
   
  
 0.566
ALX4
ALX homeobox 4.
   
    0.553
SRF
Serum response factor.
    
 0.537
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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