STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTF3Basic transcription factor 3. (206 aa)    
Predicted Functional Partners:
ENSPCAP00000006591
annotation not available
   
 
 0.991
ENSPCAP00000004458
annotation not available
   
 
 0.980
ENSPCAP00000011127
annotation not available
   
 
 0.977
RPL29
Ribosomal protein L29.
   
   0.975
ENSPCAP00000005041
annotation not available
   
 
 0.974
RPL18
Ribosomal protein L18.
   
 
 0.974
RPL30
Ribosomal protein L30.
   
   0.973
RPL8
Ribosomal protein L8.
   
   0.973
RPL14
Ribosomal protein L14.
   
 
 0.973
RPL24
Ribosomal protein L24.
   
   0.970
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.