STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRABDTraB domain containing. (368 aa)    
Predicted Functional Partners:
SURF1
SURF1 cytochrome c oxidase assembly factor.
    
   0.664
SEC61A2
SEC61 translocon alpha 2 subunit.
    
   0.627
SEC61A1
SEC61 translocon alpha 1 subunit.
    
   0.627
SLC25A11
Solute carrier family 25 member 11.
    
   0.602
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
    
   0.602
CNGA2
Cyclic nucleotide gated channel subunit alpha 2.
    
   0.602
WNK3
WNK lysine deficient protein kinase 3.
    
   0.602
WNK1
WNK lysine deficient protein kinase 1.
    
   0.602
IQCH
IQ motif containing H.
    
   0.602
CNGA4
Cyclic nucleotide gated channel subunit alpha 4.
    
   0.602
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.