STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARCN1Archain 1. (293 aa)    
Predicted Functional Partners:
COPZ1
Coatomer protein complex subunit zeta 1.
   
 0.999
COPE
Coatomer protein complex subunit epsilon.
   
 0.999
COPA
Coatomer protein complex subunit alpha.
   
 0.999
COPB2
Coatomer protein complex subunit beta 2.
   
 0.999
COPB1
Coatomer protein complex subunit beta 1.
   
 0.999
COPZ2
Coatomer protein complex subunit zeta 2.
   
 0.996
SCYL1
SCY1 like pseudokinase 1.
    
 0.991
ZW10
Zw10 kinetochore protein.
    
 0.984
TMED10
Transmembrane p24 trafficking protein 10.
   
 0.978
ENSPCAP00000004744
annotation not available
   
 0.970
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.