STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D20TBC1 domain family member 20. (427 aa)    
Predicted Functional Partners:
RAB1A
RAB1A, member RAS oncogene family.
    
 0.925
RAB1B
RAB1B, member RAS oncogene family.
    
 0.925
RAB33A
RAB33A, member RAS oncogene family.
    
 0.798
RAB33B
RAB33B, member RAS oncogene family.
    
 0.798
RAB19
RAB19, member RAS oncogene family.
    
 0.776
RAB43
RAB43, member RAS oncogene family.
    
 0.776
FILIP1L
Filamin A interacting protein 1 like.
    
 0.765
RABL6
RAB, member RAS oncogene family like 6.
    
 0.765
CGNL1
Cingulin like 1.
    
 0.765
TBC1D5
TBC1 domain family member 5.
    
 
 0.583
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.