STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D20TBC1 domain family member 20. (427 aa)    
Predicted Functional Partners:
RAB1A
RAB1A, member RAS oncogene family.
    
 0.911
RAB1B
RAB1B, member RAS oncogene family.
    
 0.911
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
      
 0.819
ENSPCAP00000015264
annotation not available
      
 0.771
RAB19
RAB19, member RAS oncogene family.
    
 0.755
RAB43
RAB43, member RAS oncogene family.
    
 0.755
RAB33A
RAB33A, member RAS oncogene family.
    
 0.741
RAB33B
RAB33B, member RAS oncogene family.
    
 0.740
TBC1D7
TBC1 domain family member 7.
      
 0.692
TBC1D21
TBC1 domain family member 21.
      
 0.691
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.