Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP78Centrosomal protein 78. (689 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 
 0.952
ENSPCAP00000015101
annotation not available
     
 0.926
DCAF1
DDB1 and CUL4 associated factor 1.
    
 0.918
UBR5
Ubiquitin protein ligase E3 component n-recognin 5.
    
 
 0.916
CEP250
Centrosomal protein 250.
    
 0.896
CEP290
Centrosomal protein 290.
    
 0.866
ENSPCAP00000007126
annotation not available
    
 
 0.818
CROCC
Ciliary rootlet coiled-coil, rootletin.
    
 0.762
CEP164
Centrosomal protein 164.
   
 0.737
CEP76
Centrosomal protein 76.
    
 0.731
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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