Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC138Coiled-coil domain containing 138. (666 aa)    
Predicted Functional Partners:
CCDC186
Coiled-coil domain containing 186.
      
 0.858
RABL6
RAB, member RAS oncogene family like 6.
      
 0.775
VPS53
VPS53 subunit of GARP complex.
      
 0.769
CCDC14
Coiled-coil domain containing 14.
    
 
 0.764
CCDC22
Coiled-coil domain containing 22.
      
 0.755
PCM1
Pericentriolar material 1.
    
   0.739
PIBF1
Progesterone immunomodulatory binding factor 1.
   
 
 0.728
VPS51
VPS51 subunit of GARP complex.
      
 0.683
VPS54
VPS54 subunit of GARP complex.
      
 0.676
ENSPCAP00000013101
annotation not available
      
 0.673
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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