Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRT20Keratin 20. (421 aa)    
Predicted Functional Partners:
KRT8
Keratin 8.
   
 0.863
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.803
C9orf16
Chromosome 9 open reading frame 16.
    
   0.796
ENSPCAP00000007126
annotation not available
    
 0.794
KRT80
Keratin 80.
    
 0.782
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.697
GATA3
GATA binding protein 3.
    
 0.677
VIM
Vimentin.
    
   0.667
DES
Desmin.
    
   0.667
RANBP2
RAN binding protein 2.
    
 0.648
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.