Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BROXBRO1 domain and CAAX motif containing. (411 aa)    
Predicted Functional Partners:
CHMP5
Charged multivesicular body protein 5.
   
 0.954
CHMP6
Charged multivesicular body protein 6.
    
 0.933
ENSPCAP00000014802
annotation not available
   
 0.928
CHMP4B
Charged multivesicular body protein 4B.
   
 0.899
CHMP4C
Charged multivesicular body protein 4C.
   
 0.899
STAM2
Signal transducing adaptor molecule 2.
    
 0.800
VPS4B
Vacuolar protein sorting 4 homolog B.
   
 0.772
MVB12A
Multivesicular body subunit 12A.
   
 
 0.750
ENSPCAP00000002281
annotation not available
    
 0.748
TSG101
Tumor susceptibility 101.
   
 0.746
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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