STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3HC1Zinc finger C3HC-type containing 1. (458 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
    
 0.837
RBX1
Ring-box 1.
    
 0.724
CUL1
Cullin 1.
    
  0.688
GPN1
GPN-loop GTPase 1.
   
    0.641
WRN
WRN RecQ like helicase.
      
 0.608
CUL3
Cullin 3.
    
  0.601
CACUL1
CDK2 associated cullin domain 1.
    
  0.591
RNF166
Ring finger protein 166.
    
 
 0.521
CCNB1
Cyclin B1.
   
 
 0.475
ENSPCAP00000012068
annotation not available
   
 
 0.475
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.